CDS

Accession Number TCMCG017C20413
gbkey CDS
Protein Id OMO83177.1
Location complement(join(85296..85426,85526..85592,85846..86086,86250..86326,86415..86480,86587..86635,86734..86784,86870..86922,87474..87528,87630..87718,87792..87877,88018..88074,88258..88459))
GeneID InterPro:IPR003316
Organism Corchorus olitorius
locus_tag COLO4_22655

Protein

Length 407aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018017.1
Definition hypothetical protein COLO4_22655 [Corchorus olitorius]
Locus_tag COLO4_22655

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor
KEGG_TC -
KEGG_Module M00391        [VIEW IN KEGG]
M00692        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K06620        [VIEW IN KEGG]
ko:K12590        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01522        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
ko04110        [VIEW IN KEGG]
ko04218        [VIEW IN KEGG]
ko04934        [VIEW IN KEGG]
ko05161        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
ko05167        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05206        [VIEW IN KEGG]
ko05212        [VIEW IN KEGG]
ko05214        [VIEW IN KEGG]
ko05215        [VIEW IN KEGG]
ko05218        [VIEW IN KEGG]
ko05219        [VIEW IN KEGG]
ko05220        [VIEW IN KEGG]
ko05222        [VIEW IN KEGG]
ko05223        [VIEW IN KEGG]
ko05224        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
map01522        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
map04934        [VIEW IN KEGG]
map05161        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
map05167        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05206        [VIEW IN KEGG]
map05212        [VIEW IN KEGG]
map05214        [VIEW IN KEGG]
map05215        [VIEW IN KEGG]
map05218        [VIEW IN KEGG]
map05219        [VIEW IN KEGG]
map05220        [VIEW IN KEGG]
map05222        [VIEW IN KEGG]
map05223        [VIEW IN KEGG]
map05224        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051445        [VIEW IN EMBL-EBI]
GO:0051446        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTATATCAGTTAAAGAGGAAGAGTGACACAGCAGATCGTGATGTTGAATCAAGTGAGTGGACGATGCATCCAGCATCCACTGAAGTGGCTAGCAGCCCCCTCCAGACTCCTGTATCAGGAAAAGGGGGAAAGGCTCAAAAAACATCAAGGCTAACAAAAAGCAATAAATCTGGTCCTCAAACTCCTGCTTCTAATCTTGGTTCTCCTGGCAACAATCTAACTCCTGCAGGTCCCTGTCGTTATGACAGCTCTCTAGGGCTTCTAACAAAGAAGTTCATCAATTTAATTAAACAAGCTGAAGATGGTATTCTTGATTTAAATAAAGCTGCTGATACATTGGAGGTGCAAAAGAGGAGGATTTACGACATAACCAATGTCCTTGAAGGAATTGGTCTCATTGAAAAGAAACTCAAGAATAGAATTCAGTGGAAGGGGCTTGATGTCTCAAGGCCTGGGGAGGTTGATGACAATGTTGCTACTTTGCAGGCAGAGGTTGAGAACCTTACTATTGAGGAACGTAGATTAGATGAACAAATAAGAGAAATGCAAGAAAGATTGCGGGATCTCAGTGAAGATGAAAATAATCAAAAGTGGCTTTTTGTCACTGAAGATGATATCAAGAGTTTACCCTGCTTCCAGAATGAAACATTGATAGCTATTAAAGCTCCACATGGAACCACTCTTGAAGTTCCGGATCCTGACGAGGCTGTTGACTATCCCCAGAGGAGATACAGGATTGTCCTCAGAAGCTCAATGGGTCCTATAGATGTTTATCTTGTCAGTCAATTTGAGGAGAAATTTGAAGAGGTACAAGGTGTAGATCCACCTGGACCACCGTCAAACAATCCATCAACTGTAGGCTTGAATGAGAACCCAACAACAACTGTGGTAACGGAAGAGAGCAGAGGGAAGGAGATTGAAATGCCGGTTGAAGATAATAATAGAATGTGCTCAGATCTTAGTACCTCACACTCACAGGACTTTGTGAGTGGGATCATGAAGATTGTTCCCTCAGAGGTTGATAGTGATGCTGATTATTGGCTTTTATCAGATCCTACTGTTAGCATTACCGACATATGGCGGACTGAACCTGGGGTTGAGTGGAGCGACTTTGGCACACTCCATGAAGATTATAGCATGGCTGCAGTTAGCACGCCACAACCGCAAACACCTCCAGCAAATACAACTGAAGTGCCTTCAACTAATTCAACCGGGAGCTGA
Protein:  
MVYQLKRKSDTADRDVESSEWTMHPASTEVASSPLQTPVSGKGGKAQKTSRLTKSNKSGPQTPASNLGSPGNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDDNVATLQAEVENLTIEERRLDEQIREMQERLRDLSEDENNQKWLFVTEDDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKFEEVQGVDPPGPPSNNPSTVGLNENPTTTVVTEESRGKEIEMPVEDNNRMCSDLSTSHSQDFVSGIMKIVPSEVDSDADYWLLSDPTVSITDIWRTEPGVEWSDFGTLHEDYSMAAVSTPQPQTPPANTTEVPSTNSTGS